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1

Charging Effects, Forces, and Conduction in Molecular Wire Systems

ELDON G. EMBERLY, GEORGE KIRCZENOW

Journal:

Annals of the New York Academy of Sciences

Année:

2002

Langue:

english

Fichier:

PDF, 2.61 MB

english, 2002

2

Theoretical study of electrical conduction through a molecule connected to metallic nanocontacts

Emberly, Eldon G., Kirczenow, George

Journal:

Physical Review B

Année:

1998

Langue:

english

Fichier:

PDF, 472 KB

english, 1998

3

Statistical mechanics of RNA folding: Importance of alphabet size

Mukhopadhyay, Ranjan, Emberly, Eldon, Tang, Chao, Wingreen, Ned S.

Journal:

Physical Review E

Année:

2003

Langue:

english

Fichier:

PDF, 63 KB

english, 2003

4

Molecular spintronics: spin-dependent electron transport in molecular wires

Eldon G. Emberly, George Kirczenow

Journal:

Chemical Physics

Année:

2002

Langue:

english

Fichier:

PDF, 256 KB

english, 2002

5

Identifying proteins of high designability via surface-exposure patterns

Eldon G. Emberly, Jonathan Miller, Chen Zeng, Ned S. Wingreen, Chao Tang

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2002

Langue:

english

Fichier:

PDF, 294 KB

english, 2002

6

Flexibility of β-sheets: Principal component analysis of database protein structures

Eldon G. Emberly, Ranjan Mukhopadhyay, Chao Tang, Ned S. Wingreen

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 479 KB

english, 2004

7

Theory of Electrical Conduction Through a Molecule

ELDON G. EMBERLY, GEORGE KIRCZENOW

Journal:

Annals of the New York Academy of Sciences

Année:

1998

Langue:

english

Fichier:

PDF, 4.74 MB

english, 1998

8

Correlation between sequence hydrophobicity and surface-exposure pattern of database proteins

Susanne Moelbert, Eldon Emberly, Chao Tang

Journal:

Protein Science

Année:

2004

Langue:

english

Fichier:

PDF, 298 KB

english, 2004

9

Conservation of regulatory elements between two species of Drosophila

Eldon Emberly, Nikolaus Rajewsky, Eric D Siggia

Journal:

BMC Bioinformatics

Année:

2003

Langue:

english

Fichier:

PDF, 396 KB

english, 2003

10

Flexibility of α-Helices: Results of a Statistical Analysis of Database Protein Structures

Eldon G. Emberly, Ranjan Mukhopadhyay, Ned S. Wingreen, Chao Tang

Journal:

Journal of Molecular Biology

Année:

2003

Langue:

english

Fichier:

PDF, 732 KB

english, 2003

11

Electron standing-wave formation in atomic wires

Emberly, Eldon G., Kirczenow, George

Journal:

Physical Review B

Année:

1999

Langue:

english

Fichier:

PDF, 124 KB

english, 1999

12

The Dependence Of Coiled-coil Chirality On Elastic Energy

Sadeghi, Sara, Emberly, Eldon

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 39 KB

english, 2009

13

Sequence Dependence of Coiled-Coil Formation and Stability Studied Using a Coarse-Grained Atomistic Model

Sadeghi, Sara, Emberly, Eldon

Journal:

Biophysical Journal

Année:

2011

Langue:

english

Fichier:

PDF, 32 KB

english, 2011

14

Self-Organized Protein Localization and DNA Segregation Inside Bacterial Cells

Modaber, Saeed Saberi, Emberly, Eldon

Journal:

Biophysical Journal

Année:

2012

Langue:

english

Fichier:

PDF, 37 KB

english, 2012

15

Transcriptional Control in the Segmentation Gene Network of Drosophila

Schroeder, Mark D., Pearce, Michael, Fak, John, Fan, HongQing, Unnerstall, Ulrich, Emberly, Eldon, Rajewsky, Nikolaus, Siggia, Eric D., Gaul, Ulrike

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 968 KB

english, 2004

16

Current-driven conformational changes, charging, and negative differential resistance in molecular wires

Emberly, Eldon G., Kirczenow, George

Journal:

Physical Review B

Année:

2001

Langue:

english

Fichier:

PDF, 77 KB

english, 2001

17

The Smallest Molecular Switch

Emberly, Eldon G., Kirczenow, George

Journal:

Physical Review Letters

Année:

2003

Langue:

english

Fichier:

PDF, 164 KB

english, 2003

18

Principles for the design and operation of a molecular wire transistor

Emberly, Eldon, Kirczenow, George

Journal:

Journal of Applied Physics

Année:

2000

Langue:

english

Fichier:

PDF, 254 KB

english, 2000

19

Distinct DNA methylation patterns of cognitive impairment and trisomy 21 in down syndrome

Jones, Meaghan J, Farré, Pau, McEwen, Lisa M, MacIsaac, Julia L, Watt, Kim, Neumann, Sarah M, Emberly, Eldon, Cynader, Max S, Virji-Babul, Naznin, Kobor, Michael S

Journal:

BMC Medical Genomics

Année:

2013

Langue:

english

Fichier:

PDF, 373 KB

english, 2013

20

Length Dependent Force Characteristics of Coiled-Coils

Sadeghi, Sara, Emberly, Eldon

Journal:

Biophysical Journal

Année:

2010

Langue:

english

Fichier:

PDF, 40 KB

english, 2010

21

Landauer theory, inelastic scattering, and electron transport in molecular wires

Emberly, Eldon G., Kirczenow, George

Journal:

Physical Review B

Année:

2000

Langue:

english

Fichier:

PDF, 224 KB

english, 2000

22

Models of electron transport through organic molecular monolayers self-assembled on nanoscale metallic contacts

Emberly, Eldon G., Kirczenow, George

Journal:

Physical Review B

Année:

2001

Langue:

english

Fichier:

PDF, 207 KB

english, 2001

23

Antiresonances in molecular wires

Emberly, Eldon G, Kirczenow, George

Journal:

Journal of Physics Condensed Matter

Année:

1999

Langue:

english

Fichier:

PDF, 198 KB

english, 1999

24

State Orthogonalization by Building a Hilbert Space: A New Approach to Electronic Quantum Transport in Molecular Wires

Emberly, Eldon, Kirczenow, George

Journal:

Physical Review Letters

Année:

1998

Langue:

english

Fichier:

PDF, 156 KB

english, 1998

25

Comment on “First-Principles Calculation of Transport Properties of a Molecular Device”

Emberly, Eldon G., Kirczenow, George

Journal:

Physical Review Letters

Année:

2001

Langue:

english

Fichier:

PDF, 54 KB

english, 2001

26

Optimizing the readout of morphogen gradients

Journal:

Physical Review E

Année:

2008

Langue:

english

Fichier:

PDF, 86 KB

english, 2008

27

Length-dependent force characteristics of coiled coils

Sadeghi, Sara, Emberly, Eldon

Journal:

Physical Review E

Année:

2009

Langue:

english

Fichier:

PDF, 274 KB

english, 2009

28

Hourglass Model for a Protein-Based Circadian Oscillator

Emberly, Eldon, Wingreen, Ned S.

Journal:

Physical Review Letters

Année:

2006

Langue:

english

Fichier:

PDF, 630 KB

english, 2006

29

Multiterminal molecular wire systems: A self-consistent theory and computer simulations of charging and transport

Emberly, Eldon G., Kirczenow, George

Journal:

Physical Review B

Année:

2000

Langue:

english

Fichier:

PDF, 111 KB

english, 2000

30

Confinement-dependent localization of diffusing aggregates in cellular geometries

Keramati, Mahdi Rezaei, Wasnik, Vaihbav, Ping, Liyan, Das, Dibyendu, Emberly, Eldon

Journal:

Physical Review E

Année:

2015

Langue:

english

Fichier:

PDF, 471 KB

english, 2015

31

Concordant and discordant DNA methylation signatures of aging in human blood and brain

Farré, Pau, Jones, Meaghan J, Meaney, Michael J, Emberly, Eldon, Turecki, Gustavo, Kobor, Michael S

Journal:

Epigenetics & Chromatin

Année:

2015

Langue:

english

Fichier:

PDF, 3.00 MB

english, 2015

32

Localization of aggregating proteins in bacteria depends on the rate of addition

Scheu, Karlton, Gill, Rakinder, Saberi, Saeed, Meyer, Pablo, Emberly, Eldon

Journal:

Frontiers in Microbiology

Année:

2014

Langue:

english

Fichier:

PDF, 1007 KB

english, 2014

33

Chromosome Driven Spatial Patterning of Proteins in Bacteria

Saberi, Saeed, Emberly, Eldon, Briggs, James M.

Journal:

PLoS Computational Biology

Année:

2010

Langue:

english

Fichier:

PDF, 309 KB

english, 2010

34

Probing long-range interactions by extracting free energies from genome-wide chromosome conformation capture data

Saberi, Saeed, Farré, Pau, Cuvier, Olivier, Emberly, Eldon

Journal:

BMC Bioinformatics

Année:

2015

Langue:

english

Fichier:

PDF, 3.80 MB

english, 2015

35

BEAF Regulates Cell-Cycle Genes through the Controlled Deposition of H3K9 Methylation Marks into Its Conserved Dual-Core Binding Sites

Emberly, Eldon, Blattes, Roxane, Schuettengruber, Bernd, Hennion, Magali, Jiang, Nan, Hart, Craig M, Käs, Emmanuel, Cuvier, Olivier, Misteli, Tom

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 1.12 MB

english, 2008

36

Non-Equilibrium Polar Localization of Proteins in Bacterial Cells

Saberi, Saeed, Emberly, Eldon, Garcia-Ojalvo, Jordi

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.72 MB

english, 2013

37

A Model for Cell Population Size Control Using Asymmetric Division

Hamidi, Mani, Emberly, Eldon, Beemster, Gerrit T.S.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 796 KB

english, 2013

38

Abrupt changes in the patterns and complexity of anterior cingulate cortex activity when food is introduced into an environment

Caracheo, Barak F., Emberly, Eldon, Hadizadeh, Shirin, Hyman, James M., Seamans, Jeremy K.

Journal:

Frontiers in Neuroscience

Année:

2013

Langue:

english

Fichier:

PDF, 3.06 MB

english, 2013

39

Children's biobehavioral reactivity to challenge predicts DNA methylation in adolescence and emerging adulthood

Goodman, Sarah J., Roubinov, Danielle S., Bush, Nicole R., Park, Mina, Farré, Pau, Emberly, Eldon, Hertzman, Clyde, Essex, Marilyn J., Kobor, Michael S., Boyce, W. Thomas

Journal:

Developmental Science

Année:

2018

Langue:

english

Fichier:

PDF, 2.00 MB

english, 2018

40

Dense neural networks for predicting chromatin conformation

Farré, Pau, Heurteau, Alexandre, Cuvier, Olivier, Emberly, Eldon

Journal:

BMC Bioinformatics

Année:

2018

Langue:

english

Fichier:

PDF, 2.00 MB

english, 2018

41

DNA segregation under Par protein control

Jindal, Lavisha, Emberly, Eldon, Rybenkov, Valentin V

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 2.38 MB

english, 2019

42

Abrupt, Asynchronous Changes in Action Representations by Anterior Cingulate Cortex Neurons during Trial and Error Learning

Emberly, Eldon, Seamans, Jeremy K

Journal:

Cerebral Cortex

Année:

2020

Fichier:

PDF, 2.22 MB

2020